screenshot of email of skin pigmentation results
edit: from documentary
To: Yoan Diekmann
Cc: Thomas, Mark
Ok Yoan,
Sorry for the delay on this.
I have done the below individual (in this email) as their coverage was much better. I only had 3 snps ... [text cut off screen] ... heterozygote at the sites did not alter the prediction below significantly. It was still around the ... [text cut off screen] ... Second issue was assuming 0 for two sites that you were missing rs12896399 (genotype GG) and ... [text cut off screen] ...
[TABLE="class: grid, width: 200"]
[TR]
[TD]SKIN[/TD]
[TD]Prob[/TD]
[/TR]
[TR]
[TD]Very Pale[/TD]
[TD]0.000[/TD]
[/TR]
[TR]
[TD]Pale[/TD]
[TD]0.000[/TD]
[/TR]
[TR]
[TD]Int.[/TD]
[TD]0.035[/TD]
[/TR]
[TR]
[TD]Dark[/TD]
[TD]0.199[/TD]
[/TR]
[TR]
[TD]Dark-Black[/TD]
[TD]0.766[/TD]
[/TR]
[/TABLE]
Adjusting for the extremes, if rs12896399 had one or two T alleles present, this raised dark to ... [text cut off screen] ...
Also, adjusting for the BNC2 rs10756819, which also wasn't available, if it had the G allele present ... [text cut off screen] ...
So all in all, it is a dark to black skin colour individual. Interestingly with intermediate eye colour ... [text cut off screen] ... can't say for sure. Though certainly I would doubt he was dark brown.
As for hair, I'm missing too many MC1R mutations that impact red, and therefore more brown ... [text cut off screen] ... would be a dark brown to black haired individual, certainly not the true black of an Asian ... [text cut off screen] ...
I've attached a little image that reflects the range of these values (.7-.8), I didn't go to 0.9 ... [text cut off screen] ... can give really.
As for the lesser coverage individual, missing 10 varients make this too difficult to call, ... [text cut off screen] ... would be the same as the above individual at all.
... [text cut off screen]
