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  1. B

    Modern FASTQ to Eigenstrat Format with AADR Merge

    what if i have access to .bam files directly? they come in different "formats" and im unsure how to proceed with them, for example
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    Admixtools qpWave: Who do you form a clade with?

    i have seen qpadm 1 way models in studies
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    Admixtools qpWave: Who do you form a clade with?

    you can do this using one way models in qpadm, no? how it differs?
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    Question qpAdm question

    im not gonna spoonfeed you further https://www.eupedia.com/forum/threads/admixtools2-tutorial-for-windows.42684/page-11#post-682635 https://www.eupedia.com/forum/threads/using-admixtools2-to-model-admixture.44759/#post-676546
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    Question qpAdm question

    there are tutorials in this very forum
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    Which admixture / ancestry is more widespread among Germans?

    voted denmark for germanic/nordic like ancestry and french for celtic/hallstat like ancestry but i dont know if that was the point of this poll
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    Admixtools Major Update to the Interactive SMARTPCA: aDNA & Modern West Eurasian PCA

    what number did you use in numoutevec? can you post the coords?
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    Admixtools Modern Italian 4-way aDNA model

    looks like matplotlib (python library), just ask chatgpt to write python code to display vertical bars like that
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    Admixtools Modern Italian 4-way aDNA model

    so its outputting two different results for target pop, one is based of directly computed f4 statics and the other computes f4 statics indirectly from precomputed f2, which one is "better"? the direct one im guessing
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    R1b DF27 in Iberia

    I searched the title and nothing pulled up, where is this from?
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    GEDMatch Latin American GEDmatch averages vs. data from academic studies

    how did you gather all those kits? also you used a script to automatize the runs right?
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    Admixtools My qpAdm Results Please Share Yours!

    try this one out target = '****' left= c('Greece_NeaNikomedeia_EN.SG','CHG/IranN','Russia_YuzhniyOleniyOstrov_Mesolithic.AG','Luxembourg_Mesolithic.DG','Morocco_EN.WGC.SG') right =...
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    Admixtools My qpAdm Results Please Share Yours!

    im talking about the merging of your merged file (the one thats 1.4 million SNP, which is fine) with the AADR database
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    Admixtools My qpAdm Results Please Share Yours!

    hmmm, maybe you are merging with the wrong database then
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    Admixtools My qpAdm Results Please Share Yours!

    smaller than it should be imo, check the SNPs (and yeah the SE very high)
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    Admixtools My qpAdm Results Please Share Yours!

    the model with jordan_ppnb is not good. how big its your merged file? I think u tested with every major company out there so it must be pretty big haha
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    MyHeritageDNA Share your MyHeritage DNA Ethnicity Estimates

    Anyone got this? its literally illustrativedna only few people have it so far and it seems to be a paid feature
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    Admixtools admixtools2 TUTORIAL for WINDOWS.

    It does take certain knowledge and skills (and even resources) + is very time consuming tho, so I can see charging for it but publicly making a business out of it is crazy "SOFTWARE COPYRIGHT NOTICE AGREEMENT This software and its documentation are copyright (2010) by Harvard University and...
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